Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906254.1_cds_XP_016456477.1_50305
CDS Infomation

[gene=LOC107780441] [db_xref=GeneID:107780441] [protein=denticleless protein homolog A-like] [protein_id=XP_016456477.1] [location=join(10061..10130,10340..10452,10555..10663,10758..10822,11975..12013,12315..12411,12528..12615,12850..12913,13000..13076,13180..13261,13499..13578,13738..13822,13903..13971,14045..14112,14188..14236,14394..14738)] [gbkey=CDS]
Sequence

ATGGAAGGATCTAATAAGCATCAATCTTTTTTTCAAGATATCAAATCAAGAGAGCTTCAC
GGATTCCGAGTTATAAAAAGACCATATATCAGCATTGAATCGTCTGAGGTTGACCAAATT
GGTGCCGTGGCTGTTGAGCACAATGGCAACACGCCACCTCCAATGGCCATCTCGTTCTGC
AAGACAAGTAAAAATTCACATATACTTGCTGTTGCTGATGAGGGTGGCTATGTTAGCTTG
TATAATACCAGGTTGAAATTTCCTCCTCCATCAACACACCAGCAAAATGCAGAAAAAGCT
AAGATGTTAGAGTGGGTCGCTCATGAAAATGCTATATTTGATGTATGTTGGATCAAGGAT
GATACAAATATATTAACTGCTTCAGGCGATCAATGCATAAAGGTATGGGATGCACAAGAA
AAGCAATGTGTTAGAGCATTAATGGGTCACACCGGGAGTGTGAAATCCATTTGTTCTCAT
CCTACGAATCAGGATATTATTGTATCTGGTTCAAGAGATGGGTCCTTTTCCCTATGGGAC
TTGAGGAGCTCGTGCAGCAGCAGTCAGATATTTTCCATACCGTCAATTGCAGCAGTCCAC
AAGGCTCACGTTTCTCCTCGTCAGAGGCGGGTTAAAGGTGGAAAGGCTACTTCCATGAGC
ATTACTTCAGTCCTTTACTTGAAAGATGAGATCTCCATTGCTACTGCTGGAGCAGTTGAC
AGTGTCATAAAGTTTTGGGATACCAGGAACCTGAAGAGTCCTATTCTCCAGGCATGCCCT
CATCCTAATGTGTCATCCCATAAGGGAAAGCGATTACATGGAGTATCTAGTATATCTCAA
GATTTAAATGGCGTGTTTATTGCTGCTTCATGCATGGACAGCAGAATCTATCTCTACAAT
GTGCTTCAGCCAGAAAAAGGGCCAGTGAAAACTTTCACAGGATGCCAAATTAATTCATTT
TTTGTTAAGTCAGCGATAAGTCCTGATGCAGCTCATGTACTCAGTGGTTCCAGTGATGGA
AATGCCTATATATGGCAGGTGAACAAACCTCTAGCAGATCCCCTAATACTGAAAAACCAT
GACGGAGAAGTTACAGCAGTAGACTGGTGCCCATCTGAGACGGGAAAAGTTGCTACAGCA
TCAGATGATTTCACGGTGCGATTTTGGAACATTCAAAGCAGTTGTTACTCAAACACAAGA
TCTCCATCGTCCATTCGAAGAAGAGTAATGGGACTTACTAACATAGAACGTCGCAAGCTG
TTCTCTGATGAAAAACCAGAAAGCATCAAGAATGACTGTCATTCAGAAAACTTGCCTAGT
TCAACTAAGACTCCTGAAATCAGCACTCCAGAGTCGCAGAAGAAGAAACATTTTCAGATT
TTTGAAGTTGAAAACTTTGAGAGAACTCCAGAAGCCGCAATCAGGAGCCCTTCTTCGGTT
CTGAATCCTCCATCCTCTTTGAAGAGGACAATTAGAGATTACTTTGTGCACAGTCAATGA

Peptide Sequence

PEP ID

XP_016456477.1
PEP Infomation

PREDICTED: denticleless protein homolog A-like [Nicotiana tabacum]
Sequence

MEGSNKHQSFFQDIKSRELHGFRVIKRPYISIESSEVDQIGAVAVEHNGNTPPPMAISFC
KTSKNSHILAVADEGGYVSLYNTRLKFPPPSTHQQNAEKAKMLEWVAHENAIFDVCWIKD
DTNILTASGDQCIKVWDAQEKQCVRALMGHTGSVKSICSHPTNQDIIVSGSRDGSFSLWD
LRSSCSSSQIFSIPSIAAVHKAHVSPRQRRVKGGKATSMSITSVLYLKDEISIATAGAVD
SVIKFWDTRNLKSPILQACPHPNVSSHKGKRLHGVSSISQDLNGVFIAASCMDSRIYLYN
VLQPEKGPVKTFTGCQINSFFVKSAISPDAAHVLSGSSDGNAYIWQVNKPLADPLILKNH
DGEVTAVDWCPSETGKVATASDDFTVRFWNIQSSCYSNTRSPSSIRRRVMGLTNIERRKL
FSDEKPESIKNDCHSENLPSSTKTPEISTPESQKKKHFQIFEVENFERTPEAAIRSPSSV
LNPPSSLKRTIRDYFVHSQ

Transcript Sequence

Gene sequence data has not been registered.